{ "_id": "6a1d3e8f1d7bb097a0a40312", "Package": "MixSIAR", "Title": "Bayesian Mixing Models in R", "Version": "3.1.12", "Authors@R": "c(\nperson(\"Brian\", \"Stock\", email = \"bstock09@gmail.com\", role = c(\"cre\",\"aut\")),\nperson(\"Brice\", \"Semmens\", email = \"semmens@ucsd.edu\", role = \"aut\"),\nperson(\"Eric\", \"Ward\", role = \"ctb\"),\nperson(\"Andrew\", \"Parnell\", role = \"ctb\"),\nperson(\"Andrew\", \"Jackson\", role = \"ctb\"),\nperson(\"Donald\", \"Phillips\", role = \"ctb\"))", "Description": "Creates and runs Bayesian mixing models to analyze\nbiological tracer data (i.e. stable isotopes, fatty acids),\nwhich estimate the proportions of source (prey) contributions\nto a mixture (consumer). 'MixSIAR' is not one model, but a\nframework that allows a user to create a mixing model based on\ntheir data structure and research questions, via options for\nfixed/ random effects, source data types, priors, and error\nterms. 'MixSIAR' incorporates several years of advances since\n'MixSIR' and 'SIAR'.", "SystemRequirements": "JAGS (>= 4.3)", "URL": "https://github.com/brianstock/MixSIAR", "BugReports": "https://github.com/brianstock/MixSIAR/issues", "Encoding": "UTF-8", "License": "GPL-3", "VignetteBuilder": "knitr", "RoxygenNote": "7.1.1", "Config/pak/sysreqs": "jags libicu-dev libssl-dev", "Repository": "https://brianstock.r-universe.dev", "Date/Publication": "2020-10-20 02:48:40 UTC", "RemoteUrl": "https://github.com/brianstock/mixsiar", "RemoteRef": "HEAD", "RemoteSha": "037978f3de245dbfae26d5c6a1ba2cc894bd4a77", "NeedsCompilation": "no", "Packaged": { "Date": "2026-06-01 08:07:36 UTC", "User": "root" }, "Author": "Brian Stock [cre, aut],\nBrice Semmens [aut],\nEric Ward [ctb],\nAndrew Parnell [ctb],\nAndrew Jackson [ctb],\nDonald Phillips [ctb]", "Maintainer": "Brian Stock ", "MD5sum": "f6be296459917c08d7d791f6f7fab4fb", "_user": "brianstock", "_type": "src", "_file": "MixSIAR_3.1.12.tar.gz", 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model (_a posteriori_)", "topics": [ "combine_sources" ] }, { "page": "compare_models", "title": "Compare the predictive accuracy of 2 or more MixSIAR models", "topics": [ "compare_models" ] }, { "page": "load_discr_data", "title": "Load trophic discrimination factor (TDF) data", "topics": [ "load_discr_data" ] }, { "page": "load_mix_data", "title": "Load mixture data", "topics": [ "load_mix_data" ] }, { "page": "load_source_data", "title": "Load source data", "topics": [ "load_source_data" ] }, { "page": "mixsiar_env", "title": "mixsiar", "topics": [ "mixsiar_env" ] }, { "page": "output_diagnostics", "title": "Output diagnostics", "topics": [ "output_diagnostics" ] }, { "page": "output_JAGS", "title": "Process mixing model output from JAGS", "topics": [ "output_JAGS" ] }, { "page": "output_pairs", "title": "Output pairs plots", "topics": [ "output_pairs" ] }, { "page": "output_posteriors", "title": "Output posterior density plots", "topics": [ "output_posteriors" ] }, { "page": "output_stats", "title": "Output summary statistics", "topics": [ "output_stats" ] }, { "page": "output_xy", "title": "Output XY/trace plots", "topics": [ "output_xy" ] }, { "page": "plot_continuous_var", "title": "Plot proportions by a continuous covariate", "topics": [ "plot_continuous_var" ] }, { "page": "plot_data", "title": "Plot biotracer data", "topics": [ "plot_data" ] }, { "page": "plot_data_one_iso", "title": "Plot biotracer data (1-D)", "topics": [ "plot_data_one_iso" ] }, { "page": "plot_data_two_iso", "title": "Plot biotracer data (2-D)", "topics": [ "plot_data_two_iso" ] }, { "page": "plot_intervals", "title": "Plot posterior uncertainty intervals from a MixSIAR model", "topics": [ "plot_intervals" ] }, { "page": "plot_prior", "title": "Plot prior", "topics": [ "plot_prior" ] }, { "page": "run_model", "title": "Run the JAGS model", "topics": [ "run_model" ] }, { "page": "summary_stat", "title": "Summary statistics from posterior of MixSIAR model", "topics": [ 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